Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs17079872 chr3:48005035 C/A 6.54E-7 173 22.6 22.25 11.53 KM Plot
UCEC rs17079906 chr3:48042192 T/C 7.16E-6 171 22.63 21.6 11.53 KM Plot
UCEC rs17130149 chr10:114679532 C/T 9.08E-12 174 22.7 20.93 2.2 KM Plot
UCEC rs17139439 chr6:5110399 A/G 3.2E-9 174 22.75 22.63 5.97 KM Plot
UCEC rs17146584 chr10:9892958 A/G 2.62E-5 173 22.2 22.9 11.53 KM Plot
UCEC rs17182118 chr14:73564685 G/T 3.73E-7 174 22.57 21.78 10.33 KM Plot
UCEC rs17182146 chr14:73590078 T/C 4.68E-7 173 22.57 22.63 10.33 KM Plot
UCEC rs17300406 chr15:84764774 T/G 5.71E-11 172 22.67 27.43 7.95 KM Plot
UCEC rs17491620 chr14:73471412 C/G 4.61E-7 174 10.33 27.05 22.57 KM Plot
UCEC rs17649989 chr11:56912317 C/T 8.05E-7 173 22.57 26.17 18.47 KM Plot
UCEC rs17709867 chr15:42800767 C/T 0.000137 172 22.38 23.27 22.43 KM Plot
UCEC rs17751412 chr14:77936969 G/T 1.94E-10 174 8.32 30.53 21.55 KM Plot
UCEC rs17771921 chr16:77568795 C/T 7.87E-9 174 21.85 26.27 4.5 KM Plot
UCEC rs17781782 chr14:73581265 T/C 4.68E-7 173 22.57 22.63 10.33 KM Plot
UCEC rs17824214 chr14:77924227 A/G 2.42E-10 171 21.5 30.53 8.32 KM Plot